Open Provenance Model

http://twiki.pasoa.ecs.soton.ac.uk/bin/view/OPM The OPM web of TWiki. TWiki is a Web-Based Collaboration Platform for the Corporate World. en-us Copyright 2012 by contributing authors TWiki Administrator [L.Moreau@ecs.soton.ac.uk] TWiki Administrator [L.Moreau@ecs.soton.ac.uk] TWiki TWiki.OPM http://twiki.pasoa.ecs.soton.ac.uk/bin/view/OPM http://twiki.pasoa.ecs.soton.ac.uk/pub/TWiki/TWikiLogos/twikiRobot46x50.gif http://twiki.pasoa.ecs.soton.ac.uk/bin/view/OPM/WebStatistics?t=2012-11-26T20:04Z Statistics for OPM Web Month: Topic views: Topic saves: File uploads: Most popular topic views: Top contributors for topic save and uploads: Nov 2012 2945 0 0 996 ... (last changed by TWikiGuest) 2012-11-26T20:04Z guest 1.1 updated major http://twiki.pasoa.ecs.soton.ac.uk/bin/rdiff/OPM/WebStatistics http://twiki.pasoa.ecs.soton.ac.uk/bin/rdiff/OPM/WebStatistics http://twiki.pasoa.ecs.soton.ac.uk/bin/view/OPM/Plier?t=2011-07-12T13:11Z PLIER: Provenance Layer Infrastructure for e-Science Resources PLIER is being developed by the Information Management Group within the Big Grid project. PLIER provides ... (last changed by AmmarBenabdelkader) 2011-07-12T13:11Z AmmarBenabdelkader 1.30 updated major http://twiki.pasoa.ecs.soton.ac.uk/bin/rdiff/OPM/Plier http://twiki.pasoa.ecs.soton.ac.uk/bin/rdiff/OPM/Plier http://twiki.pasoa.ecs.soton.ac.uk/bin/view/OPM/OpmDBTest?t=2011-07-12T13:10Z Steps involved in creating OPM (using Plier API): Hereafter, we enumerate the different steps involved in building and storing an OPM graph. The complete source code ... (last changed by AmmarBenabdelkader) 2011-07-12T13:10Z AmmarBenabdelkader 1.6 updated major http://twiki.pasoa.ecs.soton.ac.uk/bin/rdiff/OPM/OpmDBTest http://twiki.pasoa.ecs.soton.ac.uk/bin/rdiff/OPM/OpmDBTest http://twiki.pasoa.ecs.soton.ac.uk/bin/view/OPM/OpmDBTestSample?t=2011-07-12T13:03Z Create OPM Graph: Java example In this section, we provide some examples on how to use the API for buiding, storing, retrieving, updating, and deleting OPM objects ... (last changed by AmmarBenabdelkader) 2011-07-12T13:03Z AmmarBenabdelkader 1.5 updated major http://twiki.pasoa.ecs.soton.ac.uk/bin/rdiff/OPM/OpmDBTestSample http://twiki.pasoa.ecs.soton.ac.uk/bin/rdiff/OPM/OpmDBTestSample http://twiki.pasoa.ecs.soton.ac.uk/bin/view/OPM/OpmDDL?t=2011-07-11T10:05Z Implementing the OPM relational database schema: OPMRDB The following script is used to create the physical database schema of OPM into 'MySQL' database. Some minor ... (last changed by AmmarBenabdelkader) 2011-07-11T10:05Z AmmarBenabdelkader 1.10 updated major http://twiki.pasoa.ecs.soton.ac.uk/bin/rdiff/OPM/OpmDDL http://twiki.pasoa.ecs.soton.ac.uk/bin/rdiff/OPM/OpmDDL http://twiki.pasoa.ecs.soton.ac.uk/bin/view/OPM/SummaryScript?t=2011-07-07T08:40Z SQL Script to compute Summary fields The following script is used to compute summary fields in the OPMProcess and OPMGraph tables, mainly: 1. Queue, Start, and End ... (last changed by AmmarBenabdelkader) 2011-07-07T08:40Z AmmarBenabdelkader 1.3 updated major http://twiki.pasoa.ecs.soton.ac.uk/bin/rdiff/OPM/SummaryScript http://twiki.pasoa.ecs.soton.ac.uk/bin/rdiff/OPM/SummaryScript http://twiki.pasoa.ecs.soton.ac.uk/bin/view/OPM/OpmEvents?t=2011-07-06T09:50Z OPM Events in Plier It is highly required within the e-BioInfra to capture the occurrence of events during the execution of a workflow experiment (e.g. timestamp ... (last changed by AmmarBenabdelkader) 2011-07-06T09:50Z AmmarBenabdelkader 1.2 updated major http://twiki.pasoa.ecs.soton.ac.uk/bin/rdiff/OPM/OpmEvents http://twiki.pasoa.ecs.soton.ac.uk/bin/rdiff/OPM/OpmEvents http://twiki.pasoa.ecs.soton.ac.uk/bin/view/OPM/PlierToolBoxOld?t=2011-06-16T09:07Z Using the Plier Toolbox to manipulate and share OPM data and graphs PlierToolBox is a java-based application that allows the scientists to explore and share their ... (last changed by AmmarBenabdelkader) 2011-06-16T09:07Z AmmarBenabdelkader 1.1 updated major http://twiki.pasoa.ecs.soton.ac.uk/bin/rdiff/OPM/PlierToolBoxOld http://twiki.pasoa.ecs.soton.ac.uk/bin/rdiff/OPM/PlierToolBoxOld http://twiki.pasoa.ecs.soton.ac.uk/bin/view/OPM/PlierOldVersion?t=2011-06-16T09:04Z PLIER: Provenance Layer Infrastructure for e-Science Resources PLIER is being developed by the Information Management Group within the Big Grid project. PLIER provides ... (last changed by AmmarBenabdelkader) 2011-06-16T09:04Z AmmarBenabdelkader 1.1 updated major http://twiki.pasoa.ecs.soton.ac.uk/bin/rdiff/OPM/PlierOldVersion http://twiki.pasoa.ecs.soton.ac.uk/bin/rdiff/OPM/PlierOldVersion http://twiki.pasoa.ecs.soton.ac.uk/bin/view/OPM/PlierToolBox?t=2011-04-18T12:09Z Using the Plier Toolbox to manipulate and share OPM data and graphs PlierToolBox is a java-based application that allows the scientists to explore and share their ... (last changed by AmmarBenabdelkader) 2011-04-18T12:09Z AmmarBenabdelkader 1.6 updated major http://twiki.pasoa.ecs.soton.ac.uk/bin/rdiff/OPM/PlierToolBox http://twiki.pasoa.ecs.soton.ac.uk/bin/rdiff/OPM/PlierToolBox http://twiki.pasoa.ecs.soton.ac.uk/bin/view/OPM/WebHome?t=2011-02-25T13:27Z Open Provenance Model Wiki The Open Provenance Model OPM was originally crafted in a meeting held in Salt Lake City in August 2007. OPM v1.00 was released to the ... (last changed by LucMoreau) 2011-02-25T13:27Z lavm 1.55 updated major http://twiki.pasoa.ecs.soton.ac.uk/bin/rdiff/OPM/WebHome http://twiki.pasoa.ecs.soton.ac.uk/bin/rdiff/OPM/WebHome http://twiki.pasoa.ecs.soton.ac.uk/bin/view/OPM/CommunityContributions?t=2011-02-25T13:27Z Community Contributions The community is encouraged to contribute profiles, ontologies, tools, best practice documents, tutorials related to OPM. They should be posted ... (last changed by LucMoreau) 2011-02-25T13:27Z lavm 1.3 updated major http://twiki.pasoa.ecs.soton.ac.uk/bin/rdiff/OPM/CommunityContributions http://twiki.pasoa.ecs.soton.ac.uk/bin/rdiff/OPM/CommunityContributions http://twiki.pasoa.ecs.soton.ac.uk/bin/view/OPM/MySQL?t=2011-01-10T13:45Z Link to MySQL DBMS: http://www.mysql.com (last changed by AmmarBenabdelkader) 2011-01-10T13:45Z AmmarBenabdelkader 1.1 updated major http://twiki.pasoa.ecs.soton.ac.uk/bin/rdiff/OPM/MySQL http://twiki.pasoa.ecs.soton.ac.uk/bin/rdiff/OPM/MySQL http://twiki.pasoa.ecs.soton.ac.uk/bin/view/OPM/WorkInProgressSerializationV1pt1?t=2010-10-13T16:04Z Community Process for Serialization of OPM V1.1 to XML and RDF Scope A community process was used to define OPMV1.1 (cf WorkInProgressV1pt1). This community process ... (last changed by LucMoreau) 2010-10-13T16:04Z lavm 1.1 updated major http://twiki.pasoa.ecs.soton.ac.uk/bin/rdiff/OPM/WorkInProgressSerializationV1pt1 http://twiki.pasoa.ecs.soton.ac.uk/bin/rdiff/OPM/WorkInProgressSerializationV1pt1 http://twiki.pasoa.ecs.soton.ac.uk/bin/view/OPM/LatestSpecifications?t=2010-09-29T10:37Z Latest Specifications The Open Provenance Model v1.1 Luc Moreau, Ben Clifford, Juliana Freire, Joe Futrelle, Yolanda Gil, Paul Groth, Natalia Kwasnikowska, Simon ... (last changed by LucMoreau) 2010-09-29T10:37Z lavm 1.4 updated major http://twiki.pasoa.ecs.soton.ac.uk/bin/rdiff/OPM/LatestSpecifications http://twiki.pasoa.ecs.soton.ac.uk/bin/rdiff/OPM/LatestSpecifications http://twiki.pasoa.ecs.soton.ac.uk/bin/view/OPM/WebLeftBar?t=2010-09-18T14:41Z INCLUDINGWEB Web Menu Home Specifications Primer Towards V1.2 Towards V1.1 INCLUDINGWEB Web Search Changes Index Search Tree View TWiki Registration INCLUDE{" MAINWEB ... (last changed by LucMoreau) 2010-09-18T14:41Z lavm 1.10 updated major http://twiki.pasoa.ecs.soton.ac.uk/bin/rdiff/OPM/WebLeftBar http://twiki.pasoa.ecs.soton.ac.uk/bin/rdiff/OPM/WebLeftBar
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